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Assessing the complex nature of behavior. Sequence-based and transcriptomic analyses in a mouse model of extremes in trait anxiety
Assessing the complex nature of behavior. Sequence-based and transcriptomic analyses in a mouse model of extremes in trait anxiety
To unravel the molecular pylons of innate anxiety, a well established animal model has been characterized using transcriptome- and sequence-based analyses. The animal model – hyper (HAB) and hypo (LAB) anxious mice – has been created by selective inbreeding based on outbred CD1 mice using the extreme values the mice spent on the open arm of the elevated plus-maze, a test also used to screen drugs for anxiolytic or anxiogenic effects. These mice proved a robust phenotypic divergence, also for depression-like behavior and stress-axis reactivity. In a first assay, brain regions unambiguously involved in regulating anxiety-related behavior were screened for gene expression differences between HAB and LAB animals in a microarray experiment covering the whole genome. This led to the identification of thousands of differentially expressed transcripts. The highest significant results were further validated by quantitative PCR or other techniques focusing either on protein quantification or enzyme activity. Applying this strategy, differential regulation of 15 out of 28 transcripts could be validated: vasopressin, tachykinin 1, transmembrane protein 132D, RIKEN cDNA 2900019G14 gene, ectonucleotide pyrophosphatase/phosphodiesterase 5, cathepsin B, coronin 7, glyoxalase 1, pyruvate dehydrogenase beta, metallothionein 1, matrix metallopeptidase 15, zinc finger protein 672, syntaxin 3, solute carrier family 25 member 17 and ATP-binding cassette, sub-family A member 2. Additionally, analysis of cytochrome c oxidase activity resulted in the identification of differences in long-term activity between HAB and LAB mice in the amygdala and the hypothalamic paraventricular nucleus pointing to an important role of these brain regions in shaping the anxiety-related extremes in these mice. In a second genome-wide screening approach, 267 single nucleotide polymorphisms were identified to constantly differ between HAB and LAB animals (i.e. to carry the opposite homozygous genotype at these loci) and subsequently genotyped in 520 F2 mice, the offspring of reciprocally mated HABxLAB animals. These F2 mice have been previously phenotyped in a broad variety of behavioral tests and show – as descendants of intermediate heterozygotes for all polymorphic genomic loci between HAB and LAB mice – a free segregation of all alleles, thus allowing genotype-phenotype associations based on whole-genome analysis. Only focusing on the most significant findings, associations have been observed between anxiety-related behavior and loci on mouse chromosomes 5 and 11, between depression-like behavior and chromosome 2 and between stress-axis reactivity and chromosome 3. The locus on chromosome 11 is marked by a polymorphism located in the 3’ untranslated region of zinc finger protein 672, a gene also markedly overexpressed in LAB mice and expressed at lower levels in HAB mice leading to a probable causal involvement in shaping the phenotype. Further associations on chromosome 5 include two functional polymorphisms in enolase phosphatase 1 that result in a different mobility of the enzyme in proteomic assays and with a polymorphism located in the transmembrane protein 132D gene. Furthermore, independently, an association of a polymorphism in this particular gene, together with the resulting gene expression differences has been observed in a group of panic disorder patients, highlighting this gene as a causal factor underlying anxiety-related behavior and disorders in both the HAB/LAB mouse model and human patients. The combination of expression profiling and confirmation by quantitative PCR, single nucleotide polymorphism analysis and F2 association studies, i.e. unbiased and hypothesis driven approaches were key to the identification and functional characterization of loci, genes and polymorphisms causally involved in shaping anxiety-related behavior. Thus, it provides an overview of some new promising targets for future pharmaceutic treatment and will contribute to a better understanding of the molecular processes that shape anxiety and thereby also animal and human behavior.
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Czibere, Ludwig
2009
English
Universitätsbibliothek der Ludwig-Maximilians-Universität München
Czibere, Ludwig (2009): Assessing the complex nature of behavior: Sequence-based and transcriptomic analyses in a mouse model of extremes in trait anxiety. Dissertation, LMU München: Faculty of Biology
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Abstract

To unravel the molecular pylons of innate anxiety, a well established animal model has been characterized using transcriptome- and sequence-based analyses. The animal model – hyper (HAB) and hypo (LAB) anxious mice – has been created by selective inbreeding based on outbred CD1 mice using the extreme values the mice spent on the open arm of the elevated plus-maze, a test also used to screen drugs for anxiolytic or anxiogenic effects. These mice proved a robust phenotypic divergence, also for depression-like behavior and stress-axis reactivity. In a first assay, brain regions unambiguously involved in regulating anxiety-related behavior were screened for gene expression differences between HAB and LAB animals in a microarray experiment covering the whole genome. This led to the identification of thousands of differentially expressed transcripts. The highest significant results were further validated by quantitative PCR or other techniques focusing either on protein quantification or enzyme activity. Applying this strategy, differential regulation of 15 out of 28 transcripts could be validated: vasopressin, tachykinin 1, transmembrane protein 132D, RIKEN cDNA 2900019G14 gene, ectonucleotide pyrophosphatase/phosphodiesterase 5, cathepsin B, coronin 7, glyoxalase 1, pyruvate dehydrogenase beta, metallothionein 1, matrix metallopeptidase 15, zinc finger protein 672, syntaxin 3, solute carrier family 25 member 17 and ATP-binding cassette, sub-family A member 2. Additionally, analysis of cytochrome c oxidase activity resulted in the identification of differences in long-term activity between HAB and LAB mice in the amygdala and the hypothalamic paraventricular nucleus pointing to an important role of these brain regions in shaping the anxiety-related extremes in these mice. In a second genome-wide screening approach, 267 single nucleotide polymorphisms were identified to constantly differ between HAB and LAB animals (i.e. to carry the opposite homozygous genotype at these loci) and subsequently genotyped in 520 F2 mice, the offspring of reciprocally mated HABxLAB animals. These F2 mice have been previously phenotyped in a broad variety of behavioral tests and show – as descendants of intermediate heterozygotes for all polymorphic genomic loci between HAB and LAB mice – a free segregation of all alleles, thus allowing genotype-phenotype associations based on whole-genome analysis. Only focusing on the most significant findings, associations have been observed between anxiety-related behavior and loci on mouse chromosomes 5 and 11, between depression-like behavior and chromosome 2 and between stress-axis reactivity and chromosome 3. The locus on chromosome 11 is marked by a polymorphism located in the 3’ untranslated region of zinc finger protein 672, a gene also markedly overexpressed in LAB mice and expressed at lower levels in HAB mice leading to a probable causal involvement in shaping the phenotype. Further associations on chromosome 5 include two functional polymorphisms in enolase phosphatase 1 that result in a different mobility of the enzyme in proteomic assays and with a polymorphism located in the transmembrane protein 132D gene. Furthermore, independently, an association of a polymorphism in this particular gene, together with the resulting gene expression differences has been observed in a group of panic disorder patients, highlighting this gene as a causal factor underlying anxiety-related behavior and disorders in both the HAB/LAB mouse model and human patients. The combination of expression profiling and confirmation by quantitative PCR, single nucleotide polymorphism analysis and F2 association studies, i.e. unbiased and hypothesis driven approaches were key to the identification and functional characterization of loci, genes and polymorphisms causally involved in shaping anxiety-related behavior. Thus, it provides an overview of some new promising targets for future pharmaceutic treatment and will contribute to a better understanding of the molecular processes that shape anxiety and thereby also animal and human behavior.